It may sound too good to be true, but coffee is incredibly healthy for most people! Rich in polyphenols and other protective compounds, quality, organic coffee can be part of an overall healthy lifestyle. This article shares the best organic coffee brands including whole bean, ground, and coffee pods.

woman holding a coffee in her hands on a tabletop.

Health Benefits of Coffee

Coffee has been shown to help protect against disease. It is rich in a type of antioxidant known as polyphenols, plus other protective compounds.

Research also shows that drinking coffee can help protect against liver disease, colon cancer, Parkinson’s disease, and more.

Choosing Organic

But, it’s important to choose quality coffee beans that haven’t been sprayed with pesticides. By purchasing certified organic coffee beans, you can rest assured that your coffee is clean and clear.

Some people also like to take the extra step and choose coffee beans that are both organic and fair-trade. Fair-trade means the farmers are paid a living wage.

You can buy organic (and often fair-trade) coffee in whole beans, ground, and even coffee pods now. I’ve included the best organic coffee brands below.

Note: this post is not sponsored; all opinions are my own!

coffee beans on a table.

How to Make Coffee Using Beans

If you’ve only purchased ground coffee to make at home before, it’s time to consider buying the beans. By purchasing the whole bean, you’ll also have the oils intact. Then, you’ll just need to use a grinder to grind the beans before brewing the coffee.

After you grind the beans, place the ground coffee into a filter. Then, run hot water through the filter by using a coffee maker or a drip-device. Either way, you’ll be rewarded with the best cup of coffee you’ve ever had, right in your own kitchen.

See my related recipes for how to make butter coffee or my Maca Coffee recipe. For those on a dairy-free diet, don’t miss my round-up of the best vegan creamers.

Additionally, see my recipes for Iced Americano and Iced Coffee if you want a cold drink instead of hot. Or, feel free to transform your coffee into dessert with these Coffee Popsicles!

making coffee in a coffee maker.

Best Organic Coffees

In this article, I’ll share the best coffee beans that are certified organic. I’ll also offer some organic and fair-trade options. For the best results, buy the roasted beans and a quality coffee grinder.

1. Best Overall Organic Coffee Value: AmazonFresh Organic Fair Trade Peru Whole Bean Coffee

If you don’t have a huge budget for coffee, then these whole beans from Amazon are a great value! They are organic and fair trade and made using 100% Arabica beans from high altitudes in South America. They have the organic label with organic certification.

This is also a fair-trade product meaning the workers who picked the beans on the coffee plantations were paid a fair price and fair wage.

While I recommend using whole beans, you can also buy AmazonFresh organic and fair-trade ground coffee!

amazonfresh fair trade peru whole bean.

2. Best Organic Light Roast: Allegro Coffee Organic Breakfast Blend

This light roast coffee with caramel and citrus is perfect for those that prefer iced coffee. Lighter roasts often have lower acidity, which is also helped by the cold brew process. It won’t have any strong flavors that turn bitter when brewed.

You can also buy the Allegro organic ground coffee.

allegro coffee organic breakfast blend.

3. Best Organic “Half Caf” Blend: Real Good Coffee Co Whole Bean Coffee

This organic whole bean coffee has “cedar and lemon” notes which means it’s light and fresh. While the company has several blends, their half-caffeinated blend is a winner.

For fans of arabica coffee, this one is a winner.

The bag also has a zip top, making it easier to stay fresh. One of the hardest parts about good coffee is keeping the beans fresh once you open the bag.

real good coffee co whole bean coffee.

4. Best Organic Medium Dark Roast: Jose’s Whole Bean Coffee

This one is a “medium dark roast” so it is billed as being strong but not bitter or burnt as some dark roasts tend to be. It is rich in flavor to please dark roast fanatics but easy enough to share with those that prefer something lighter.

This is my husbands’s favorite coffee brand and a top pick for coffee drinkers. It’s also low acidity so great for anyone who might have heartburn from drinking coffee (see my article on how to reduce heartburn from coffee).

jose's whole bean coffee

6. Best Organic Specialty Coffee: Stumptown Coffee Roasters

Portland knows coffee, and Stumptown is no exception. Hugely popular on the internet, they have fans around the country. This blend is interesting since they aren’t using single origin beans, so they can combine unique flavors into one.

stumptown coffee roasters organic coffee.

7. Best Organic Medium Roast: Kicking Horse Coffee

With stone fruit and cocoa flavors, this is my best pick for a medium roast. Besides treating the farmers well, this brand strives to treat the planet well too, making sure your coffee is a sustainable morning treat.

kicking horse coffee organic beans

8. Best Organic Decaf: Natural Force Organic, Mold Free Clean Decaf Coffee

There are a few things to look for when buying decaffeinated coffee. First, you want a coffee that has been decaffeinated using the “swiss water process.” Second, you want to buy organic.

Natural Force has all of these qualities, plus it’s tested for mold. Highly recommend for a strong flavor that is USDA organic without synthetic pesticides applied to the coffee plants.

Check my related list of the Best Organic Decaf Coffee.

natural force clean decaf bag.

9. Best Organic Coffee Pods: AmazonFresh Organic Fair Trade K-Cups, Peru Medium Roast

While grinding your own coffee beans at home will give you the best flavor overall, some of us prefer the convenience of coffee pods. These organic and fair-trade pods from AmazonFresh offer convenience, value, and great flavor. They are compatible with Keureg.


What is the healthiest coffee?

Coffee is healthy based on a number of factors. First, you have to decide if coffee works for you. If you don’t feel well drinking coffee, then maybe dry decaf instead. Or, try drinking coffee after a meal instead of on an empty stomach.

Secondly, you need to work with a quality brand. Choose organic coffee to avoid beans that have been sprayed with pesticides or that are GMO.

Lastly, be cautious of what you put into your coffee. Too much sugar or creamers made with hydrogenated oils are not healthy. Use quality milk, dairy-free milk, or cream. If you want to sweeten your coffee, try one of these best natural sweeteners.

What is healthier: filtered coffee or French press?

The science shows that drinking coffee is healthy for most people. However, people who have high cholesterol should always use a paper filter and should avoid French press coffee.

Is instant coffee healthy?

Instant coffee is essentially just dehydrated coffee. It is healthy as long as you buy organic versions and you don’t add a ton of fake creamer ingredients or sugar. I like this brand of organic instant coffee.

How do you make protein coffee?

The easiest way is to add a scoop of collage protein to your hot cup of coffee. See my recipe for Protein Coffee.

mug of steaming coffee on table.


Once you learn the lingo of fair-trade, direct trade, organic, and more, you will discover why it is so important to buy high-quality coffee. Not only are you getting the best flavor, you are also supporting the planet and farmers. Once you experiment with different brands on this list, you can really learn to enjoy what roasts and brewing method you like best.

From Central America to all of Latin America, you’re sure to find the best organic coffee beans for your taste buds. Try to choose organic products over conventional coffee to avoid toxic chemicals used in coffee production.

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